Information for 6-GCTGCATCTGAGAAGC (Motif 7)

A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
Reverse Opposite:
A C T G A T G C A G C T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C G T A C T G T A G C C T G A A C T G A G T C
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 19.8bp
Average Position of motif in Background35.9 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGCATCTGAGAAGC
--NVCAGCTGBBNN--
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCATCTGAGAAGC
NNTNCGCACCTGTNGAN-
 A C G T A C G T A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCATCTGAGAAGC
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTGCATCTGAGAAGC
--CGCACCTGCT----
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTGCATCTGAGAAGC--
---GNNACCGAGAATNNN
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:GCTGCATCTGAGAAGC
----------NGAAGC
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTGCATCTGAGAAGC
--CGCAGCTGCG----
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCTGCATCTGAGAAGC
----TTTCTNAGAAAN
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTGCATCTGAGAAGC
--AACACCTGCT----
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCTGCATCTGAGAAGC
--NNCACCTGNN----
 A C T G A G T C A G C T A T C G A G T C C G T A A G C T A G T C A C G T A C T G T C G A A T C G C G T A C T G A A T C G A G T C
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T