Information for 5-CTGCCCAAATCTACAT (Motif 6)

A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T
Reverse Opposite:
C G T A A G C T A T C G A C G T C T G A A C T G C G T A A G C T A C G T A C G T A C T G C T A G A C T G A T G C C G T A A C T G
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 18.2bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGCCCAAATCTACAT
----TCCAATCCACA-
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T
A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTGCCCAAATCTACAT-
-----SSAATCCACANN
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCCCAAATCTACAT-
-TGCCAAAATAAACANN
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGCCCAAATCTACAT
CTGCCCGCA-------
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGCCCAAATCTACAT
GGGTGTGCCCAAAAGG----
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTGCCCAAATCTACAT--
-CGACCCAATCAACGGTG
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

ONECUT1/MA0679.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTGCCCAAATCTACAT-
---AAAAAATCGATAAT
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T A C G T
A C G T A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGCCCAAATCTACAT
ATGCCCACC-------
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CTGCCCAAATCTACAT
-----CAAATCACTG-
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CTGCCCAAATCTACAT---
------AAATTAGCATAAT
 A G T C A C G T A T C G G T A C A G T C A G T C C G T A C G T A C T G A C G A T A G T C A G C T C G T A A T G C C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T