Information for 10-CAGAGTTCTG (Motif 17)

A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C T G C A T A C G T G C A C T G A A G T C G A C T A G T C C G A T A C T G
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.825
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif175.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets34.0 +/- 27.3bp
Average Position of motif in Background51.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAGAGTTCTG
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAGAGTTCTG
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGAGTTCTG------
-AGNGTTCTAATGANN
 A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGAGTTCTG
CAAAGGTCAG
 A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGTTCTG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGTTCTG
CACAGN------
 A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CAGAGTTCTG---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAGAGTTCTG
GAGGTCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CAGAGTTCTG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CAGAGTTCTG
TCAGTCTT---
 A C G T A G T C C G T A T C A G C T G A T C A G A G C T A C G T A G T C A C G T A C T G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T