Information for 12-CTTTTWAAAAGAA (Motif 11)

G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A
Reverse Opposite:
A G C T A C G T G T A C A C G T A C G T A C G T C G A T C G A T C G T A C G T A C G T A C G T A A C T G
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.842
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.4 +/- 21.7bp
Average Position of motif in Background43.2 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTTWAAAAGAA
CCTTTTATAGNC--
 A C G T G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTTTWAAAAGAA
CGGTTTCAAA----
 A C G T G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTTTWAAAAGAA--
ATGCTAAAAATAGAA
 G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTTWAAAAGAA
-NATTCAAAT---
 G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTTTWAAAAGAA
CCGTATTATAAACAA
 A C G T A C G T G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTTTTWAAAAGAA----
GTTAAAAAAAAAAATTA
 G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTTTWAAAAGAA-
--DCYAAAAATAGM
 G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A A C G T
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTTTWAAAAGAA
GCTCGTAAAAA---
 A C G T G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTTTWAAAAGAA-
--TCTAAAAATAGA
 G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A A C G T
A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTTTWAAAAGAA-
TCTTTANTAATANN
 G T A C A C G T A C G T A C G T C G A T G C T A C G T A C G T A C G T A C G T A A C T G G T C A C T G A A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T