Information for 6-ATGAATGAACAAG (Motif 6)

G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
Reverse Opposite:
A G T C A G C T C G A T C T A G A G C T C A G T A T G C C G T A C G A T A C G T A T G C C G T A A C G T
p-value:1e-12
log p-value:-2.860e+01
Information Content per bp:1.802
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets57.4 +/- 28.3bp
Average Position of motif in Background49.3 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGAATGAACAAG
ACTATGAATGAATGAT
 A C G T A C G T A C G T G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ATGAATGAACAAG
NNTNTCATGAATGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAATGAACAAG
NTTNTATGAATGTGNNC-
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGAATGAACAAG
TCCAATCCACA--
 G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGAATGAACAAG--
ATGAATATTCATGAG
 G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGAATGAACAAG--
AACAAACAACAAGAG
 G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGAATGAACAAG
GATGACTCAGCA--
 A C G T G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGAATGAACAAG
CAGCATGACTCAGCA--
 A C G T A C G T A C G T A C G T G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGAATGAACAAG
-SSAATCCACANN
 G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGAATGAACAAG
ATGMATATDC---
 G T C A A C G T A T C G C G T A C G T A C G A T A T C G G C T A C T G A A G T C C G T A C T G A C T A G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T