Information for 3-TRAACATGTTTTRACA (Motif 3)

G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
Reverse Opposite:
C G A T C A T G C G A T G A C T C G T A G C T A C T G A C G T A A T G C C T G A G C A T C A T G A C G T A G C T A G T C C G T A
p-value:1e-17
log p-value:-4.096e+01
Information Content per bp:1.677
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.2 +/- 26.7bp
Average Position of motif in Background53.2 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TRAACATGTTTTRACA
ANTNNTACATGTANNTN--
 A C G T A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T

TP63/MA0525.2/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TRAACATGTTTTRACA----
--AACATGTTGGGACATGTC
 G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A G T C C T G A G C A T A C T G G A C T G A C T T C A G A C T G C T A G C T G A A G T C C G T A G A C T A C T G G A C T G T A C

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TRAACATGTTTTRACA
NNTTTTACATGTANNNT--
 A C G T A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TRAACATGTTTTRACA
ANTNTTACATGTATNTA--
 A C G T A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TRAACATGTTTTRACA----
--GACATGTCTGGACATGTC
 G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TRAACATGTTTTRACA
AATATACATGTAATATA-
 A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TRAACATGTTTTRACA
ANTATTACATGTANNNN--
 A C G T A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TRAACATGTTTTRACA
ANTTNTACATGTANTTN--
 A C G T A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TRAACATGTTTTRACA
NAAACCGGTTTT----
 G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TRAACATGTTTTRACA
ATGTAAACADGS-------
 A C G T A C G T A C G T G C A T T C A G C T G A G T C A G T A C C G T A G A C T A T C G C G A T A G C T C A G T C G A T C T G A C G T A G T A C G C T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T