Information for 18-AAATGTCCTTAGG (Motif 27)

G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
Reverse Opposite:
A G T C G A T C A G C T C T G A C T G A C T A G T C A G C T G A A G T C C G T A C G A T C A G T A C G T
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.715
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif101.4
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets53.3 +/- 18.9bp
Average Position of motif in Background43.2 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAATGTCCTTAGG
AAGATATCCTT---
 A C G T G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAATGTCCTTAGG
---TGACCTYA--
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAATGTCCTTAGG---
--NTGCCCANNGGTNA
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAATGTCCTTAGG-
--ATGCCCTGAGGC
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAATGTCCTTAGG
AACATATGTC------
 A C G T A C G T A C G T G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAATGTCCTTAGG
---TGACCTTGAN
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAATGTCCTTAGG
---TGACCTTGAV
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATGTCCTTAGG---
--NTGCCCTTGGGCGN
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATGTCCTTAGG
--ATGACCTTGA-
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATGTCCTTAGG-
--WTGSCCTSAGGS
 G T C A G C T A C G T A A C G T A C T G A G C T A G T C A G T C G A C T A G C T T C G A C T A G C T A G A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C