Information for 10-AGTTTAGCAG (Motif 26)

C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T C G T A C G T A C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 25.3bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTAGCAG----
ANATTTTACGAGNNNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTAGCAG
ANCGTTTANN--
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTAGCAG----
NAATTTTACGAGNTNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

MYBL2/MA0777.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTAGCAG--
GACNGTTTAACGGTT
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTTTAGCAG
GGATTAGC--
 C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTTTAGCAG-
NTTTTACGAGN
 C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTTTAGCAG-
-NNTTGGCANN
 C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTTTAGCAG-
AGGGTAACAGC
 C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGTTTAGCAG---
---TTMACACCTT
 C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTTTAGCAG
NYYTGTTTACHN-
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A A C G T