Information for 5-ACTATGCATT (Motif 18)

G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A T C G A G T C C G T A A C G T C G T A A C T G A C G T
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.942
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 29.5bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACTATGCATT
GAATATTCAT-
 A C G T G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACTATGCATT
GHATATKCAT-
 A C G T G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGCATT----
TNNATTATGCATANNTT
 A C G T A C G T A C G T G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGCATT
TGAATTATGCAT-
 A C G T A C G T A C G T G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTATGCATT---
--TGTGGATTNNN
 G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTATGCATT----
ANTATCGATTTTTN
 G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTATGCATT--
NNTGTGGATTSS
 G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACTATGCATT-
TTCATTTGCATAT
 A C G T A C G T G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTATGCATT----
ATTATCGATTTTTT
 G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTATGCATT------
NNCATTCATTCATNNN
 G T C A A G T C A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T