Information for 13-AAATTGAAAAATA (Motif 16)

C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
Reverse Opposite:
A C G T C G T A A G C T A C G T A C G T A G C T A C G T A G T C G T C A G T C A A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.934
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 28.3bp
Average Position of motif in Background53.2 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAATTGAAAAATA
-AATGGAAAAT--
 C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAATTGAAAAATA--
CAATTGCAAAAATAT
 C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAATTGAAAAATA
-NATGGAAAAN--
 C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAATTGAAAAATA---
-ATGCTAAAAATAGAA
 C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAATTGAAAAATA
GGAAANTGAAACTNA
 A C G T A C G T C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAATTGAAAAATA
GAAAGTGAAAGT--
 A C G T C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGAAAAATA
GAAACTGAAACT--
 A C G T C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAATTGAAAAATA
ACGAAAGCGAAAGT--
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGAAAAATA
GAAAMTGAAACT--
 A C G T C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAATTGAAAAATA
-AATGGAAAAT--
 C G T A C G T A C G T A A C G T C A G T A C T G C G T A C T G A C G T A C G T A C T G A A C G T C G T A
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T