Information for 4-GCAGGCAAGG (Motif 14)

C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G
Reverse Opposite:
T G A C A G T C A G C T G A C T C T A G A G T C A G T C A G C T A C T G G A T C
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.671
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif10.43%
Number of Background Sequences with motif1109.4
Percentage of Background Sequences with motif4.53%
Average Position of motif in Targets55.2 +/- 23.9bp
Average Position of motif in Background51.3 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCAGGCAAGG--
-AAGGCAAGTGT
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAGGCAAGG--
-CAGGTAAGTAT
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCAGGCAAGG
-CAGGTGAGG
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCAGGCAAGG
TBGCACGCAA--
 A C G T A C G T C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAGGCAAGG-
-CAGATAAGGN
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCAAGG
NNGAGATAAGA
 A C G T C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCAGGCAAGG-
ANAGATAAGAA
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCAAGG
NACAGGAAAT-
 A C G T C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAGGCAAGG
VCAGGTRDRY
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGGCAAGG-
-NAGATAAGNN
 C T A G T G A C C T G A T C A G T C A G G A T C C T G A C T G A T C A G A C T G A C G T
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A