Information for 4-AMTTSTSCCTYTMCAM (Motif 11)

C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
Reverse Opposite:
A C T G C G A T A C T G C A G T C G T A C T G A C G T A A C T G A C T G A T C G C G T A A T C G C G T A C G T A C A G T A G C T
p-value:1e-12
log p-value:-2.764e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 7.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AMTTSTSCCTYTMCAM
AATCAATTGTTCCGCTA---
 A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AMTTSTSCCTYTMCAM
TACTTCCGCTTTTT---
 A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AMTTSTSCCTYTMCAM
-----TKCTGTTCCA-
 C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AMTTSTSCCTYTMCAM
CACTTCCYCTTT-----
 A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----AMTTSTSCCTYTMCAM
CNNNTATTGTTCNNNNN---
 A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----AMTTSTSCCTYTMCAM
ANNTCCATTGTTCNNN-----
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.47
Offset:8
Orientation:forward strand
Alignment:AMTTSTSCCTYTMCAM
--------TTTTCCA-
 C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----AMTTSTSCCTYTMCAM
NNTTTATTGTTCTNNN----
 A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:AMTTSTSCCTYTMCAM
-----TTCCTCT----
 C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----AMTTSTSCCTYTMCAM
AANTTATTGTTCTNNA----
 A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C G T T A G C A C G T A T G C A G T C A G T C A C G T A G C T A C G T G T C A A G T C C G T A G T A C
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T A C G T A C G T