Information for 4-AGAGCCAGCYTGK (Motif 8)

C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
Reverse Opposite:
G T C A A G T C C G T A T C G A T A C G A G T C G C A T A C T G T C A G A G T C A C G T A G T C C G A T
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.738
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.6 +/- 19.8bp
Average Position of motif in Background61.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGCCAGCYTGK
-CAGCC-------
 C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGAGCCAGCYTGK
GRTGMTRGAGCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCCAGCYTGK
CGGAGC--------
 A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCCAGCYTGK
TTGAGTGSTT------
 A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGAGCCAGCYTGK
BTBRAGTGSN-------
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGAGCCAGCYTGK
NGNTCTAGAACCNGV----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCCAGCYTGK
CTYRAGTGSY-------
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCCAGCYTGK
TGCTGASTCAGC----
 A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGAGCCAGCYTGK
CGTGCCAAG----
 C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:AGAGCCAGCYTGK
------TGCGTG-
 C G T A A C T G G T C A A C T G A G T C T G A C C G T A T C A G A T G C A G C T C G A T A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T