Information for 7-ACATGTCTRG (Motif 7)

G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G
Reverse Opposite:
A T G C G A C T C G T A C T A G C T G A A G T C G T C A C G A T A C T G A C G T
p-value:1e-20
log p-value:-4.744e+01
Information Content per bp:1.734
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif622.3
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets46.7 +/- 25.2bp
Average Position of motif in Background51.5 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACATGTCTRG
NNACTTGCCTT-
 A C G T A C G T G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACATGTCTRG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACATGTCTRG
NCACCTGTN---
 A C G T A C G T G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGTCTRG----
ACATGCCCGGGCAT
 G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACATGTCTRG
--CTGTCTGG
 G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACATGTCTRG-
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACATGTCTRG
--TWGTCTGV
 G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACATGTCTRG
VBSYGTCTGG
 G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

TP53/MA0106.3/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACATGTCTRG-------
GACATGCCCGGGCATGTT
 A C G T G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACATGTCTRG-------
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T G T C A A G T C G C T A C A G T A C T G A G C T A G T C C G A T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C