Information for 19-TTTGTSTASACAA (Motif 21)

A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A
Reverse Opposite:
C G A T A G C T A C T G A C G T A T G C G A C T C G T A A T G C G T C A G T A C C G T A G C T A C T G A
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.713
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.4 +/- 21.5bp
Average Position of motif in Background55.2 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TTTGTSTASACAA
--TGTCTAGACG-
 A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTSTASACAA---
NTNTATGTGCACATNNN
 A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTGTSTASACAA-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTSTASACAA
NNNNTTTGTTTACNNT-
 A C G T A C G T A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTSTASACAA-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTTGTSTASACAA-
--TATGTAAACANG
 A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTGTSTASACAA
CCATTGTATGCAAAT
 A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTSTASACAA-
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTSTASACAA-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTSTASACAA-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G C A G T A T C G G C A T C G T A A T C G G T C A G T A C C T G A C G T A A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T