Information for 18-TCGWGGCTGCTYT (Motif 20)

G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
Reverse Opposite:
T C G A T C G A C T G A A C T G A G T C G C T A C A T G T A G C A G T C C G A T A G T C T A C G C T G A
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.602
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 27.8bp
Average Position of motif in Background73.2 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCGWGGCTGCTYT
--TWGTCTGV---
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCGWGGCTGCTYT
----NGCTN----
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCGWGGCTGCTYT
-CGCAGCTGCG--
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCGWGGCTGCTYT
-----GCTGTG--
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCGWGGCTGCTYT
VBSYGTCTGG---
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCGWGGCTGCTYT
-----GCTTCC--
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCGWGGCTGCTYT--
CTCAGCAGCTGCTACTG
 A C G T A C G T G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCGWGGCTGCTYT----
-CNNNGCTACTGTANNN
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCGWGGCTGCTYT
-AGCAGCTGCT--
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCGWGGCTGCTYT
--NNNANTGA---
 G A C T A T G C T C A G G C T A C T A G A T C G G A T C C G A T C T A G T A G C G A C T A G C T A G C T
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T