Information for 13-CAATCTCCAAACC (Motif 14)

A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T A C T G A C T G C T G A A T C G G T C A A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.4 +/- 21.5bp
Average Position of motif in Background71.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAATCTCCAAACC---
-CGTATCGAAACCAAA
 A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAATCTCCAAACC
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAATCTCCAAACC-----
-CTGATCGAAACCAAAGT
 A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAATCTCCAAACC
GGGGTCAAAGTCCAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAATCTCCAAACC--
ATAAACCGAAACCAA
 A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAATCTCCAAACC-
CTTATCTCHMCATCT
 A C G T A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------CAATCTCCAAACC
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CAATCTCCAAACC--
----CTTCACACCTA
 A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAATCTCCAAACC
TCCAATCCACA----
 A C G T A C G T A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAATCTCCAAACC-----
-NNTTTTCACACCTTNNN
 A G T C C G T A C G T A A C G T A T G C A G C T A G T C A G T C C G T A G T C A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C