Information for 11-ATGGTGTGAA (Motif 13)

C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A G T C C G T A G T A C G A T C G C T A C G A T
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.2 +/- 23.8bp
Average Position of motif in Background40.9 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:ATGGTGTGAA
AAGGTGTGAA
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---ATGGTGTGAA----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ATGGTGTGAA---
AAGGTGTGAAAAT
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ATGGTGTGAA-
TAGGTGTGAAG
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ATGGTGTGAA-
AAGGTGTGAAA
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ATGGTGTGAA
AAGGTGTKAA
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.80
Offset:1
Orientation:forward strand
Alignment:ATGGTGTGAA-
-AGGTGTGAAA
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ATGGTGTGAA
-AGGTGTGA-
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATGGTGTGAA-
-AGGTGTGAAM
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATGGTGTGAA
-AGGTGTGA-
 C G T A C G A T C T A G A C T G A C G T C T A G C G A T C T A G C G T A C G T A
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T