Information for 12-CATCTTGGCAAKA (Motif 11)

G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C C G A T A C G T A T C G A T G C G T A C C G T A C G T A A C T G C G T A A C G T A C T G
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.834
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 31.4bp
Average Position of motif in Background70.1 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CATCTTGGCAAKA
--NNTTGGCANN-
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CATCTTGGCAAKA
---CTTGGCAA--
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CATCTTGGCAAKA
---NTTGGCANN-
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CATCTTGGCAAKA
----TTGGCA---
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATCTTGGCAAKA
---CSTGGGAAAD
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CATCTTGGCAAKA-
--SCCTAGCAACAG
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CATCTTGGCAAKA
GCNGCCATCTTG------
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATCTTGGCAAKA
--GGTTGGCAT--
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATCTTGGCAAKA
-TTCTTGGAAAN-
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CATCTTGGCAAKA--
-----TTGCAACATN
 G T A C C G T A C G A T A G T C C G A T A C G T A C T G A T C G A T G C C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C