Information for 15-TGCTGRGCYCAGC (Motif 19)

A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A C T G C T G A A C T G A G T C A G C T A G T C C G T A A C T G A G T C C G T A
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.9 +/- 25.5bp
Average Position of motif in Background49.8 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGRGCYCAGC
NNTCCTGCTGTGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCTGRGCYCAGC
CCTGCTGAGH-----
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCTGRGCYCAGC
AATTTGCTGAC------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGRGCYCAGC
TCNCCTGCTGNGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGRGCYCAGC
CCCCCTGCTGTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGRGCYCAGC
TNTCCTGCTGTGNNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TGCTGRGCYCAGC
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGCTGRGCYCAGC--
-----TGCCCAGNHW
 A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCTGRGCYCAGC
TGCTGACTCA---
 A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGRGCYCAGC
AAANTGCTGACTNAG--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T G C
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T