Information for 5-CGCTCGGCATTGTGGC (Motif 17)

A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C G C T A A G T C C G T A C G T A A G C T A C T G A G T C A G T C A C T G C G T A A C T G A G T C A T C G
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.894
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 15.4bp
Average Position of motif in Background79.5 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGCTCGGCATTGTGGC--
--CAATGCATTGTGGGTA
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCTCGGCATTGTGGC-
---TTGGCATGGTGCCA
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CGCTCGGCATTGTGGC
-------CTTTGT---
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGCTCGGCATTGTGGC--
--CTTGGCANNNTGCCAA
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CGCTCGGCATTGTGGC
------CCWTTGTYYB
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCTCGGCATTGTGGC
-GCTCGGSCTC-----
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGCTCGGCATTGTGGC
-----CTCATTGTC--
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CGCTCGGCATTGTGGC---
-------NNHTGTGGTTWN
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CGCTCGGCATTGTGGC-----
------WCATTTTGKCCTCYT
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGCTCGGCATTGTGGC
-NGTGGGCAT------
 A T G C A C T G A G T C C G A T T G A C A C T G A C T G A G T C C T G A C G A T C G A T A C T G C G A T A C T G A C T G A G T C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T