Information for 4-GGGAGGGAGCGAGCGA (Motif 11)

T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
Reverse Opposite:
A G C T A T G C A T C G A G T C A C G T T A G C A T C G A T G C C G A T A T G C A T G C A G T C G A C T A T G C A T G C A T G C
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.702
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif130.1
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets51.7 +/- 28.4bp
Average Position of motif in Background52.0 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAGGGAGCGAGCGA
GGGCGGGACC------
 T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGGAGCGAGCGA
TGGCAGNCTGCCAG---
 A C G T T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGAGGGAGCGAGCGA
GGGCGGGAAGG-----
 T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGAGGGAGCGAGCGA
----CGGAGC------
 T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGAGGGAGCGAGCGA
----GAGSCCGAGC--
 T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGAGGGAGCGAGCGA
------CAGCC-----
 T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGGGAGCGAGCGA
TTGGCANNNTGCCAAG--
 A C G T A C G T T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGGGAGCGAGCGA-----
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GGGAGGGAGCGAGCGA
GGGCGGGAAGG-----
 T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGGAGCGAGCGA
NNNAAGGGGGCGGGNNN
 A C G T T A C G T A C G A T C G C T G A C T A G T A C G A T C G C G T A A T C G A T G C A T C G G T C A C T A G T A G C A T C G T C G A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C