Information for 21-TGCCAGGGCAGCTCTT (Motif 41)

A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A C T A G C G T A A T C G G T A C A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G G T A C G T C A
p-value:1e-7
log p-value:-1.757e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 25.2bp
Average Position of motif in Background61.0 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGGGCAGCTCTT
ATGCCCGGGCATGT---
 A C G T A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGGGCAGCTCTT
TTGCCATGGCAACN---
 A C G T A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCCAGGGCAGCTCTT
WDNCTGGGCA------
 A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGGGCAGCTCTT
TTGCCATGGCAACC---
 A C G T A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGCCAGGGCAGCTCTT
CGGTTGCCATGGCAAC----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCCAGGGCAGCTCTT
KGTTGCCATGGCAAC----
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TGCCAGGGCAGCTCTT
--------CAGCTGTT
 A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGGGCAGCTCTT
GTTGCCATGGNAAC----
 A C G T A C G T A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGCCAGGGCAGCTCTT
------AGCAGCTGCT
 A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGCCAGGGCAGCTCTT
-----NNGCAGCTGTT
 A C G T A C T G A G T C A G T C T G C A C T A G A C T G A C T G A G T C C G T A A C T G A T G C A C G T A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T