Information for 20-GCACGYASAGSTG (Motif 39)

T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
Reverse Opposite:
G T A C C G T A A T G C A G T C A C G T A T C G C G A T T C G A A G T C A C T G A C G T A C T G A T G C
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.877
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif43.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets43.0 +/- 23.2bp
Average Position of motif in Background61.3 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCACGYASAGSTG
BGCACGTA------
 A C G T T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCACGYASAGSTG
GCACGTAY-----
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCACGYASAGSTG
GCACGTNC-----
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCACGYASAGSTG
TBGCACGCAA-----
 A C G T A C G T T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCACGYASAGSTG
GCACGTACCC---
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCACGYASAGSTG---
------ACAGCTGTTN
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GCACGYASAGSTG--
-----AACAGGTGNT
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCACGYASAGSTG--
--NGNGACAGCTGCN
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G A C G T A C G T
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCACGYASAGSTG
-----AACAGCTG
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCACGYASAGSTG---
-----AACAGCTGCAG
 T A C G A G T C C G T A A G T C C T A G A G C T C G T A A T G C C G T A A C T G A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G