Information for 14-GCTGGGACAGCTT (Motif 29)

A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
Reverse Opposite:
G T C A G T C A A C T G A G T C C G A T A T C G A C G T A G T C A G T C A G T C C G T A C T A G A G T C
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.869
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 29.7bp
Average Position of motif in Background44.4 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTGGGACAGCTT
CCAGGAACAG---
 A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGACAGCTT
GGTTGGCAT-----
 A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGACAGCTT
TGCTGASTCAGC--
 A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTGGGACAGCTT
CSTGGGAAAD---
 A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGGGACAGCTT--
--NGNGACAGCTGCN
 A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGGGACAGCTT
--TGGAACAGMA-
 A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGGGACAGCTT
RGSMTBCTGGGAAAT---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCTGGGACAGCTT-
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

MAFG/MA0659.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGGACAGCTT---
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCTGGGACAGCTT---
-----AACAGCTGCAG
 A C T G A G T C A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G