Information for 24-CACGTAGCTACTT (Motif 27)

A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
Reverse Opposite:
C T G A G C T A C T A G C G A T C T G A A C T G A T G C A G C T T C G A A G T C C T A G A C G T A T C G
p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.0 +/- 34.0bp
Average Position of motif in Background32.4 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACGTAGCTACTT
GCACGTACCC----
 A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACGTAGCTACTT
GCACGTNC------
 A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACGTAGCTACTT
GCACGTAY------
 A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACGTAGCTACTT
ACACGTGGC-----
 A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACGTAGCTACTT
BGCACGTA-------
 A C G T A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACGTAGCTACTT
GGCACGTGNC-----
 A C G T A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACGTAGCTACTT
--CGCAGCTGCG-
 A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CACGTAGCTACTT-
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACGTAGCTACTT
GACACGTGCC-----
 A C G T A C G T A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACGTAGCTACTT
CACGCA-------
 A T G C C G T A G A T C A C T G A G C T T C G A A T C G A G T C A G C T C G T A A G T C C G A T A G C T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T