p-value: | 1e-7 |
log p-value: | -1.732e+01 |
Information Content per bp: | 1.854 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.20% |
Number of Background Sequences with motif | 59.0 |
Percentage of Background Sequences with motif | 0.12% |
Average Position of motif in Targets | 40.7 +/- 26.5bp |
Average Position of motif in Background | 54.5 +/- 30.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACCCTGCT--- -CCCCCTGCTGTG |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTACCCTGCT---- ----CCTGCTGAGH |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACCCTGCT------ -TCNCCTGCTGNGNNN |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACCCTGCT------ -TNTCCTGCTGTGNNG |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACCCTGCT BNTGDCCTTG-- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTACCCTGCT-- NNCNTGACCCCGCTCT |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTACCCTGCT------ -NNTCCTGCTGTGNNN |
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Spz1/MA0111.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTACCCTGCT GCTGTTACCCT--- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTACCCTGCT---- GGCCYCCTGCTGDGH |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTACCCTGCT NNACTTACCTN--- |
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