| p-value: | 1e-8 |
| log p-value: | -1.944e+01 |
| Information Content per bp: | 1.862 |
| Number of Target Sequences with motif | 11.0 |
| Percentage of Target Sequences with motif | 1.20% |
| Number of Background Sequences with motif | 47.5 |
| Percentage of Background Sequences with motif | 0.10% |
| Average Position of motif in Targets | 49.3 +/- 25.7bp |
| Average Position of motif in Background | 62.0 +/- 30.3bp |
| Strand Bias (log2 ratio + to - strand density) | 2.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
PH0139.1_Pitx3/Jaspar
| Match Rank: | 1 |
| Score: | 0.64
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CTAATGCCGC-
GNNAGCTAATCCCCCN |
|
|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 2 |
| Score: | 0.63
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CTAATGCCGC
-TAATCCCN- |
|
|
|
YY2/MA0748.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTAATGCCGC--
-TAATGGCGGNC |
|
|
|
PITX3/MA0714.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTAATGCCGC
CTTAATCCC-- |
|
|
|
GSC/MA0648.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTAATGCCGC
GCTAATCCCC- |
|
|
|
Pitx1/MA0682.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CTAATGCCGC
TTAATCCC-- |
|
|
|
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
| Match Rank: | 7 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTAATGCCGC
YTAATCCY-- |
|
|
|
PH0122.1_Obox2/Jaspar
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTAATGCCGC---
ATAGTTAATCCCCCTCA |
|
|
|
PH0123.1_Obox3/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTAATGCCGC---
ATAGTTAATCCCCCNNA |
|
|
|
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTAATGCCGC
NYTAATCCYB- |
|
|
|
