Information for 12-ACAGCCAACGTCG (Motif 20)

C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
Reverse Opposite:
A G T C A T C G C G T A A G T C A C T G A C G T A C G T A C T G A C T G A G T C A C G T A T C G A G C T
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 16.2bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACAGCCAACGTCG
--TGCCAA-----
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACAGCCAACGTCG
CGTGCCAAG----
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCCAACGTCG
BCAGACWA-----
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACAGCCAACGTCG----
-TGGGCGACGTCGTTAA
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G A C G T A C G T A C G T A C G T
A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCAACGTCG
CACAGN--------
 A C G T C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACAGCCAACGTCG-----
-TATTCAAGGTCATGCGA
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACAGCCAACGTCG
-CAGCC-------
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACAGCCAACGTCG
GGTGCCAAGT---
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACAGCCAACGTCG
---NTCAAGGTCA
 C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACAGCCAACGTCG-
AGACCCCCCACGAAGC
 A C G T A C G T C T G A A T G C C G T A A C T G A G T C A G T C C G T A C G T A G T A C A C T G A C G T A T G C C T A G A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C