Information for 6-CAAAGCCCCGCCC (Motif 7)

A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C T C A G A C T G C T A G A C T G A T G C A G C T A C G T G A C T A T C G
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.776
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif161.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets49.1 +/- 25.7bp
Average Position of motif in Background49.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:CAAAGCCCCGCCC---
--NAGCCCCGCCCCCN
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.83
Offset:3
Orientation:forward strand
Alignment:CAAAGCCCCGCCC--
---GGCCCCGCCCCC
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.81
Offset:4
Orientation:forward strand
Alignment:CAAAGCCCCGCCC-
----GCCCCGCCCC
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CAAAGCCCCGCCC----
--NRGCCCCRCCCHBNN
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:CAAAGCCCCGCCC-
----GCCCCACCCA
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:CAAAGCCCCGCCC---
----GCTCCGCCCMCY
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CAAAGCCCCGCCC----
-TCGACCCCGCCCCTAT
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.78
Offset:4
Orientation:forward strand
Alignment:CAAAGCCCCGCCC--
----GCCCCGCCCCC
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CAAAGCCCCGCCC-----
-TAAGCCACGCCCCCTTT
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:CAAAGCCCCGCCC-
----GCCMCRCCCH
 A T G C C G T A T G C A T C G A T A C G A G T C G A T C G T A C A G T C A C T G A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T