Information for 3-GCCATCTTGCCGC (Motif 5)

A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
Reverse Opposite:
T A C G A T G C T C A G C T A G A T G C G C T A C G T A T A C G C G T A A G C T C T A G A T C G A G T C
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.780
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.3 +/- 25.2bp
Average Position of motif in Background44.1 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTTGCCGC
GCNGCCATCTTG----
 A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTTGCCGC
GCCGCCATCTTG----
 A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTTGCCGC
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCATCTTGCCGC
GCCATCTGTT---
 A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCCATCTTGCCGC
GTCCGCCATTA------
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCCATCTTGCCGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCATCTTGCCGC
GCCAGCTGBTNB-
 A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCATCTTGCCGC
ACCATCTGTT---
 A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GCCATCTTGCCGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTTGCCGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A C G T A T G C C G A T C A G T A T C G A G T C A G T C A T C G A T G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A