Information for 4-GGGCGCTGCTGCCCCG (Motif 4)

T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A C T G C T A G A T G C G T C A A C T G A G T C T C G A A C T G A T G C A T C G A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.147e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.9 +/- 24.9bp
Average Position of motif in Background50.8 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGCGCTGCTGCCCCG
AGATGCTRCTRCCHT-
 T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGCGCTGCTGCCCCG
---CGCAGCTGCG---
 T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGCGCTGCTGCCCCG
-GGNGCGNCTGTTNNN
 T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGGCGCTGCTGCCCCG
AGGGGGCGGGGCTG-----
 A C G T A C G T A C G T T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGCGCTGCTGCCCCG
MKGGGYGTGGCC------
 A C G T A C G T T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGCTGCTGCCCCG
GGGGGCGGGGCC------
 A C G T A C G T T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGGCGCTGCTGCCCCG
---TGCAGCTGTCCCT
 T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCTGCTGCCCCG
TGGGTGGGGC-------
 A C G T T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCTGCTGCCCCG
NNVDGGGYGGGGCYN-----
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCTGCTGCCCCG
DGGGYGKGGC-------
 A C G T T C A G C T A G A C T G A T G C A T C G G T A C A C G T A C T G A G T C C A G T A T C G A G T C A G T C T A G C A G T C C T A G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T