p-value: | 1e-5 |
log p-value: | -1.297e+01 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 1.48% |
Number of Background Sequences with motif | 132.9 |
Percentage of Background Sequences with motif | 0.29% |
Average Position of motif in Targets | 49.0 +/- 25.9bp |
Average Position of motif in Background | 47.5 +/- 32.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCATKCMTGARTG- GTCATGCHTGRCTGS |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCATKCMTGARTG- NGTCACGCTTGGCTGC |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCATKCMTGARTG----- -NTTNTATGAATGTGNNC |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCATKCMTGARTG- NNTNTCATGAATGT |
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PAX9/MA0781.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCATKCMTGARTG--- TGCAGTCATGCGTGACG |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GCATKCMTGARTG--- -----CTTGAGTGGCT |
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TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCATKCMTGARTG RCATTCCWGG--- |
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PAX1/MA0779.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCATKCMTGARTG--- NGCANTCATGCGTGACG |
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TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCATKCMTGARTG RCATTCCWGG--- |
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Dux/MA0611.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GCATKCMTGARTG- ------TTGATTGN |
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