Information for 7-SAGKAGTSASAGA (Motif 10)

A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
Reverse Opposite:
C A G T A G T C A C G T A T C G A C G T A T G C C G T A A G T C A C G T G T A C G A T C A C G T A T C G
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.871
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.4 +/- 19.2bp
Average Position of motif in Background58.2 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:SAGKAGTSASAGA--
---AGGTGHCAGACA
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----SAGKAGTSASAGA
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SAGKAGTSASAGA
-AGGTGTGA----
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:SAGKAGTSASAGA
-AGGTGTGA----
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:SAGKAGTSASAGA-
--TGAGTGACAGSC
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SAGKAGTSASAGA
-AGGTGTGA----
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SAGKAGTSASAGA
-AGGTGTGA----
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SAGKAGTSASAGA---
---AGGTGNCAGACAG
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SAGKAGTSASAGA
-NTGATTGACAGN
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SAGKAGTSASAGA
NATGAGTCACN--
 A T G C C G T A C A T G A C T G C G T A A C T G A C G T A T C G C G T A A T G C C G T A A C T G G C T A
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T