Information for 3-TGGGAAATGTAGTCTK (Motif 7)

A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
Reverse Opposite:
T G A C G C T A C T A G C G T A A T G C G A C T T C G A A T G C C T G A G C A T G C A T C A G T A T G C A G T C G A T C C T G A
p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.667
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif80.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.7 +/- 22.3bp
Average Position of motif in Background50.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGGGAAATGTAGTCTK
-GGGAATTGTAGT---
 A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAAATGTAGTCTK
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAAATGTAGTCTK
GCATTCTGGGAATTGTAGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATGTAGTCTK
CSTGGGAAAD--------
 A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TGGGAAATGTAGTCTK-
---------TWGTCTGV
 A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAAATGTAGTCTK
RGSMTBCTGGGAAAT--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGGGAAATGTAGTCTK
WDNCTGGGCA----------
 A C G T A C G T A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATGTAGTCTK
TNNGGGCAG---------
 A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGGGAAATGTAGTCTK
-TGGAACAGMA-----
 A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATGTAGTCTK
NGTGGGCAT---------
 A C G T A C G T A G C T C T A G A C T G A T C G G T C A C G T A C G T A A G C T A T C G A C G T C T G A T A C G A C G T A G T C C A G T A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T