p-value: | 1e-8 |
log p-value: | -1.856e+01 |
Information Content per bp: | 1.818 |
Number of Target Sequences with motif | 29.0 |
Percentage of Target Sequences with motif | 3.28% |
Number of Background Sequences with motif | 426.4 |
Percentage of Background Sequences with motif | 0.92% |
Average Position of motif in Targets | 48.2 +/- 25.9bp |
Average Position of motif in Background | 53.2 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.04 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGCCAGC -CTTGGCAA- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTTGCCAGC- --ATGCCAACC |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTTGCCAGC -CGTGCCAAG |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTTGCCAGC --TTGACAGC |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTTGCCAGC ---TGCCAA- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTGCCAGC NNACTTGCCTT- |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTTGCCAGC----- ACTATGCCAACCTACC |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGCCAGC- -VBTGWCAGCB |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGCCAGC-- --TGCCCAGNHW |
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PH0170.1_Tgif2/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCTTGCCAGC----- GTATTGACAGCTNNTT |
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