Information for 10-CTCAGAGAVATGGGAV (Motif 18)

A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
Reverse Opposite:
A C T G A C G T A T G C A G T C A G T C C G T A A G C T A G T C C G A T A T G C A C G T A T G C A C G T A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.773
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 25.6bp
Average Position of motif in Background37.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTCAGAGAVATGGGAV
----AACAGATGGT--
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTCAGAGAVATGGGAV
----AACAGATGGC--
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:3
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAGAVATGGGAV-
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTCAGAGAVATGGGAV
-----NNATAAGGNN-
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CTCAGAGAVATGGGAV
---TGATTRATGGCY-
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CTCAGAGAVATGGGAV
---ANAGATAAGAA--
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CTCAGAGAVATGGGAV--
---RGSMTBCTGGGAAAT
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CTCAGAGAVATGGGAV
----NACATATGGN--
 A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGAGAVATGGGAV
TCACACCTAGGTGTGA-
 A C G T A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A A C G T

TBX19/MA0804.1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGAGAVATGGGAV-
TTTCACACCTAGGTGTGAAN
 A C G T A C G T A C G T A G T C C G A T A G T C C G T A A T C G C G T A A T C G G C T A T A C G C T G A C G A T A C T G A C T G A T C G G T C A T A G C A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A