Information for 5-GGGCCTGGCTCAG (Motif 12)

A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
Reverse Opposite:
A T G C G A C T A C T G T G C A T A C G A G T C G T A C T G C A A C T G A T C G A G T C T G A C A T G C
p-value:1e-10
log p-value:-2.327e+01
Information Content per bp:1.766
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif124.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets51.1 +/- 27.9bp
Average Position of motif in Background49.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGCCTGGCTCAG
AGGCCTAG-----
 A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGCCTGGCTCAG
MKGGGYGTGGCC---
 A C G T A C G T A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCCTGGCTCAG
NAAGGGGGCGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGCCTGGCTCAG
AGGCCTNG-----
 A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGCCTGGCTCAG
TGGGTGGGGC----
 A C G T A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGCCTGGCTCAG
DGGGYGKGGC----
 A C G T A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGGCCTGGCTCAG
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGGCCTGGCTCAG----------
---YCAGGCWCAGTACCAGGCTC
 A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCTGGCTCAG
CAGGCCNNGGCCNN
 A C G T A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGCCTGGCTCAG
---CCAGGAACAG
 A T C G A C T G A C T G T A G C A G T C A C G T C A T G T C A G A T G C A C G T A G T C C T G A A T C G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G