Information for 8-GAAGCCCAGGATGCTG (Motif 11)

A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A T G C G T C A A C G T A G T C G T A C A G C T C A T G A C T G A C T G A G T C C G A T A G C T A G T C
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 26.3bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCCAGGATGCTG
NGAAGC-----------
 A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAGCCCAGGATGCTG
ATTTCCCAGVAKSCY-
 A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:-9
Orientation:reverse strand
Alignment:---------GAAGCCCAGGATGCTG
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAAGCCCAGGATGCTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCCCAGGATGCTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCCAGGATGCTG
CGGAGC-----------
 A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCCAGGATGCTG
TGAACCCGATGACCC--
 A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAAGCCCAGGATGCTG
-CAGCC----------
 A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.49
Offset:12
Orientation:forward strand
Alignment:GAAGCCCAGGATGCTG--
------------GCTGTG
 A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GAAGCCCAGGATGCTG
ACTAGCCAATCA-----
 A C G T A C T G C T G A C G T A A C T G A G T C A G T C G T A C C T G A C A T G A C T G C G T A A C G T A T C G A G T C A C G T A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T