Information for 5-GGGATCCTCCTGCGCC (Motif 6)

A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
Reverse Opposite:
C T A G A C T G A T G C A C T G G T A C C G T A A C T G A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A T G C
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.4 +/- 17.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGATCCTCCTGCGCC
GGCCYCCTGCTGDGH-
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGATCCTCCTGCGCC
AGGGGATTCCCCT-----
 A C G T A C G T A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGATCCTCCTGCGCC
--CCCCCGCCCCCGCC
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGATCCTCCTGCGCC-
--NNTCCTGCTGTGNNN
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGATCCTCCTGCGCC
-CNGTCCTCCC-----
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGATCCTCCTGCGCC
AGGGGATTCCCCT-----
 A C G T A C G T A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGGATCCTCCTGCGCC
----NCTTCCCGCCC-
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGATCCTCCTGCGCC
---SNGCACCTGCHS-
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGGATCCTCCTGCGCC-
--TNTCCTGCTGTGNNG
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGGATCCTCCTGCGCC
-----GCGCCTGCGCA
 A T C G A C T G A C T G G T C A C G A T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A G T C A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A