Information for 1-CGCCATCATG (Motif 2)

A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
Reverse Opposite:
T A G C T G C A G C A T T A C G C T G A A C G T A C T G A T C G T G A C T A C G
p-value:1e-15
log p-value:-3.519e+01
Information Content per bp:1.661
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.02%
Number of Background Sequences with motif1228.1
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets46.5 +/- 25.4bp
Average Position of motif in Background51.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCATG
GCCGCCATCTTG
 A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CGCCATCATG
GTCCGCCATTA--
 A C G T A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCATG
GCNGCCATCTTG
 A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Atf3/MA0605.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATCATG
ACGTCATC---
 A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCATG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCATCATG
CTGCCCGCA--
 A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCATG
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCCATCATG
AGCGCGCC------
 A C G T A C G T A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CGCCATCATG
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATCATG--
ATGACATCATCNN
 A C G T A T G C A C T G T A G C T A G C T G C A G A C T A T G C C G T A A C G T A T C G A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T