Information for 7-CACTGTCCGCCGC (Motif 19)

A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C
Reverse Opposite:
A C T G A T G C A C T G A C T G G T A C C T A G A C T G G T C A T G A C C G T A A T C G G A C T A C T G
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.816
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 25.1bp
Average Position of motif in Background56.2 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACTGTCCGCCGC
CAACGTCCGCGG-
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACTGTCCGCCGC--
--CTGTCTGTCACCT
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CACTGTCCGCCGC--
---TGTCTGDCACCT
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACTGTCCGCCGC
--CTGTCTGG---
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACTGTCCGCCGC
CTCATTGTC------
 A C G T A C G T A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CACTGTCCGCCGC-----
--ATCCCCGCCCCTAAAA
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACTGTCCGCCGC-----
-TCACCCCGCCCCAAATT
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACTGTCCGCCGC--
CCGTCTTCCCCCTCAC
 A C G T A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CACTGTCCGCCGC
ACCACTCTCGGTCAC
 A C G T A C G T A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CACTGTCCGCCGC
-VBTGWCAGCB--
 A G T C C T G A A T G C A C G T A C T G A C G T A G T C A G T C A C T G T A G C A G T C T A C G G T A C
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T