Information for 15-ATTDATTAAATGGAAT (Motif 29)

C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
Reverse Opposite:
G T C A A C G T A G C T A G T C G T A C C T G A C G A T A C G T A C G T C G T A C G T A C G A T G C T A G T C A C G T A A G C T
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets25.9 +/- 17.0bp
Average Position of motif in Background45.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0128.1_Otp/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATTDATTAAATGGAAT
CGTAATTAATTAATTGG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
T G A C T C A G G A C T C G T A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C A G T C A T G A C T G A C G T A C G T A C G T

PH0173.1_Uncx/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTDATTAAATGGAAT
CATAATTAATTAACGCG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G A C G T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTDATTAAATGGAAT
NNTTTTTAATTAATTCG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G A C G T A C G T A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTDATTAAATGGAAT
NNTNNTTAATTAATNCG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G A C G T A C G T A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTDATTAAATGGAAT
CGGAATTAATTAATAGG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
T A G C T C A G A C T G G C T A T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A G C T C T G A A T C G A T C G A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTDATTAAATGGAAT
CGAATTAATTAAATACT--
 A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTDATTAAATGGAAT
GNTNATTAATTAACNNG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G A C G T A C G T A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATTDATTAAATGGAAT
AATTAATTAATTAATTC----
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C A C G T A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTDATTAAATGGAAT
GATTATTAATTAACTTG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T A C G T A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTDATTAAATGGAAT
NNNAATTAATTAANGNG---
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C A G T C G T A C G A T C G A T G T C A C G T A C G T A A G C T A C T G A C T G C T G A C G T A A C G T
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G A C G T A C G T A C G T