Information for 2-GCTTGCAAAATGT (Motif 6)

A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.900
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 25.4bp
Average Position of motif in Background42.0 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCTTGCAAAATGT-
CAATTGCAAAAATAT
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCTTGCAAAATGT
-ATTGCACAATA-
 A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTTGCAAAATGT
CGGTTTCAAA----
 A C G T A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTGCAAAATGT
--TTGCAACATN-
 A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTTGCAAAATGT
-VTTRCATAAY--
 A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTTGCAAAATGT
GCTCGTAAAAA--
 A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTTGCAAAATGT
-GTTGCGCAAT--
 A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTTGCAAAATGT
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTTGCAAAATGT
-ATTGCATAA---
 A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTGCAAAATGT
NNNCAGCTGTCAATATN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G A T C T A G A G C T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T