Information for 1-AGCACHTTTT (Motif 4)

C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G T A C A G T A C T G A C G T A C T G T A G C C G A T
p-value:1e-12
log p-value:-2.985e+01
Information Content per bp:1.743
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.90%
Number of Background Sequences with motif588.9
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets57.1 +/- 18.1bp
Average Position of motif in Background51.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGCACHTTTT--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AGCACHTTTT
AAGTCAGCANTTTTN
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AGCACHTTTT
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.67
Offset:-8
Orientation:reverse strand
Alignment:--------AGCACHTTTT
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:5
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------AGCACHTTTT
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AGCACHTTTT
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGCACHTTTT
NGTCAGCANTTT--
 A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGCACHTTTT
GTCAGCANNTN--
 A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AGCACHTTTT-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCACHTTTT
TTMACACCTT--
 A C G T A C G T C G T A A T C G T G A C C G T A T G A C G T C A C G A T A C G T G C A T C G A T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T