Information for 13-CMGAGATGTTAAT (Motif 27)

A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
Reverse Opposite:
G T C A A C G T C A G T G T C A G C T A G T A C C G T A A C G T A G T C A C G T G A T C C A T G A T C G
p-value:1e-5
log p-value:-1.190e+01
Information Content per bp:1.701
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif176.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets54.2 +/- 26.7bp
Average Position of motif in Background51.9 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CMGAGATGTTAAT
---AGGTGTTAAT
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CMGAGATGTTAAT----
--NAGATWNBNATCTNN
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CMGAGATGTTAAT
TCCAGATGTT---
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CMGAGATGTTAAT
CATCCAGATGTTC--
 A C G T A C G T A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CMGAGATGTTAAT
--AAGGTGTGAA-
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CMGAGATGTTAAT---
----TATGCWAATBAV
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CMGAGATGTTAAT
--TAGGTGTGAAG
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CMGAGATGTTAAT
--AAGGTGTKAA-
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CMGAGATGTTAAT---
-----ATATTAATTAA
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CMGAGATGTTAAT
---AGGTGTGAAA
 A T G C G T A C C T A G C G T A A C T G G T C A C G A T A C T G C G A T A C G T G C T A G T C A A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A