Information for 5-CTGTAACAGG (Motif 24)

A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
Reverse Opposite:
T G A C A T G C A C G T C T A G A C G T C G A T G T C A A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.356e+01
Information Content per bp:1.753
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif179.2
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets41.2 +/- 23.4bp
Average Position of motif in Background52.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGTAACAGG
CCAGGAACAG-
 A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACAGG-
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACAGG-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACAGG-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAACAGG
GCTGTCAA---
 A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAACAGG
GCTGTTACCCT
 A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAACAGG
CCTGTCAA---
 A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTAACAGG
GCTGTG-----
 A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAACAGG
GNCTATAAAAGG
 A C G T A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACAGG
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T A G A C G T G C T A C G T A A G T C G T C A A T C G A C T G
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T