Information for 2-GGAAAAATCA (Motif 12)

C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A
Reverse Opposite:
C G A T C A T G T C G A A C G T C G A T A C G T A C G T A G C T A T G C G T A C
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.843
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif488.0
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets51.5 +/- 25.5bp
Average Position of motif in Background50.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGAAAAATCA-----
AAGGCGAAATCATCGCA
 A C G T A C G T C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAATCA
TGGAAAA----
 A C G T C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAATCA
AATGGAAAAT---
 A C G T A C G T A C G T C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGAAAAATCA---
---CAAATCACTG
 C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGAAAAATCA-----
-AAAAAATCAATAAT
 C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAATCA
NNTGGAAANN---
 A C G T A C G T A C G T C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAATCA
NATGGAAAAN---
 A C G T A C G T A C G T C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAATCA
AATGGAAAAT---
 A C G T A C G T A C G T C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGAAAAATCA-
--AAAAGTCAA
 C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAAAAATCA-----
-AAAAAATCGATAAT
 C A T G T A C G T C G A C G T A C G T A G C T A C G T A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T