Information for 3-TTCTGCSCTGCTGSAC (Motif 8)

G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
Reverse Opposite:
A T C G G A C T A T C G A T G C C G T A A T C G A G T C C G T A C A T G T A G C A C T G T A G C G T C A C A T G G T C A C G T A
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.677
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.1 +/- 20.9bp
Average Position of motif in Background48.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC--
---TCNCCTGCTGNGNNN
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC--
---TNTCCTGCTGTGNNG
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC
----CAGCAGCTGN--
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC--
---NNTCCTGCTGTGNNN
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC
-------CAGCTGNT-
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC
---CCCCCTGCTGTG-
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TTCTGCSCTGCTGSAC
------CCTGCTGAGH
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCTGCSCTGCTGSAC---
--CTCAGCAGCTGCTACTG
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TTCTGCSCTGCTGSAC
--------NGCTN---
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTCTGCSCTGCTGSAC
-----CGCAGCTGCG-
 G A C T A C G T G A T C A C G T A T C G T G A C A T C G G T A C C G A T A C T G A T G C C G A T A T C G T A G C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T