Information for 1-GCCTAGGGACCGCCMG (Motif 2)

A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G
Reverse Opposite:
T G A C C A G T A C T G A C T G A T G C C T A G A C T G A C G T A G T C G T A C A G T C C A G T T G C A A C T G C T A G T G A C
p-value:1e-11
log p-value:-2.713e+01
Information Content per bp:1.698
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.2 +/- 19.3bp
Average Position of motif in Background44.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGACCGCCMG
TCCCNNGGGACN-----
 A C G T A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCTAGGGACCGCCMG---
--CATAAGACCACCATTAC
 A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCTAGGGACCGCCMG
ATTCCCAAGGGAAT-----
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCTAGGGACCGCCMG---
---TATCGACCCCCCACAG
 A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCCTAGGGACCGCCMG--
-------GTCCGCCATTA
 A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCTAGGGACCGCCMG-
-----GGCCCCGCCCCC
 A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCCTAGGGACCGCCMG-
-NNNGGGGCGCCCCCNN
 A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGACCGCCMG
TGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGGACCGCCMG
AGGCCTAG----------
 A C G T A C G T A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGACCGCCMG
TCCCCTGGGGAC-----
 A C G T A C T G A G T C A G T C A C G T G C T A C T A G A C T G T A C G T G C A T A G C A G T C T A C G A G T C G T A C G T C A A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T